Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 FSCN1P1-201ENST00000568912 1481 ntBASIC17.95■□□□□ 0.46
SLC28A1O00337 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 B3GAT3P1-201ENST00000471720 806 ntBASIC17.95■□□□□ 0.46
SLC28A1O00337 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 FAM197Y4-202ENST00000622692 608 ntBASIC17.95■□□□□ 0.46
SLC28A1O00337 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A1O00337 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
SLC28A1O00337 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC28A1O00337 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 NOC2LP2-201ENST00000407594 1944 ntBASIC17.94■□□□□ 0.46
SLC28A1O00337 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC28A1O00337 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC28A1O00337 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC28A1O00337 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC28A1O00337 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC28A1O00337 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC28A1O00337 MIR4651-201ENST00000582622 73 ntBASIC17.94■□□□□ 0.46
SLC28A1O00337 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC28A1O00337 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
SLC28A1O00337 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC28A1O00337 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A1O00337 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 AL109659.2-201ENST00000606809 1674 ntBASIC17.93■□□□□ 0.46
SLC28A1O00337 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC28A1O00337 AC018470.1-201ENST00000624790 3129 ntBASIC17.93■□□□□ 0.46
SLC28A1O00337 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC28A1O00337 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC28A1O00337 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC28A1O00337 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC28A1O00337 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC28A1O00337 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 AP000692.2-201ENST00000608391 879 ntBASIC17.93■□□□□ 0.46
SLC28A1O00337 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC28A1O00337 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC28A1O00337 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC28A1O00337 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC28A1O00337 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
SLC28A1O00337 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A1O00337 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms