Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK1AO00322 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.68■□□□□ 0.42
UPK1AO00322 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.68■□□□□ 0.42
UPK1AO00322 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UPK1AO00322 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK1AO00322 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.68■□□□□ 0.42
UPK1AO00322 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK1AO00322 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK1AO00322 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
UPK1AO00322 AIRN-201ENST00000601203 4374 ntBASIC17.68■□□□□ 0.42
UPK1AO00322 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1AO00322 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UPK1AO00322 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.67■□□□□ 0.42
UPK1AO00322 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.67■□□□□ 0.42
UPK1AO00322 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 AL162741.1-201ENST00000565563 1558 ntBASIC17.67■□□□□ 0.42
UPK1AO00322 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.67■□□□□ 0.42
UPK1AO00322 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1AO00322 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1AO00322 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.67■□□□□ 0.42
UPK1AO00322 REXO1L10P-201ENST00000615707 1290 ntBASIC17.67■□□□□ 0.42
UPK1AO00322 REXO1L12P-201ENST00000622156 912 ntBASIC17.67■□□□□ 0.42
UPK1AO00322 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1AO00322 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
UPK1AO00322 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1AO00322 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UPK1AO00322 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1AO00322 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
UPK1AO00322 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1AO00322 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UPK1AO00322 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
UPK1AO00322 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 ESPNP-201ENST00000270691 2015 ntBASIC17.66■□□□□ 0.42
UPK1AO00322 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UPK1AO00322 MIR718-201ENST00000390190 70 ntBASIC17.66■□□□□ 0.42
UPK1AO00322 AL355355.2-201ENST00000442321 338 ntBASIC17.66■□□□□ 0.42
UPK1AO00322 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.66■□□□□ 0.42
UPK1AO00322 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.66■□□□□ 0.42
UPK1AO00322 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.66■□□□□ 0.42
UPK1AO00322 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
UPK1AO00322 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
UPK1AO00322 AC026471.5-201ENST00000615068 467 ntBASIC17.66■□□□□ 0.42
UPK1AO00322 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.66■□□□□ 0.42
UPK1AO00322 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UPK1AO00322 AP006294.2-201ENST00000641667 209 ntBASIC17.66■□□□□ 0.42
UPK1AO00322 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UPK1AO00322 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.66■□□□□ 0.42
UPK1AO00322 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.66■□□□□ 0.42
UPK1AO00322 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UPK1AO00322 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.66■□□□□ 0.42
UPK1AO00322 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UPK1AO00322 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1AO00322 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
UPK1AO00322 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
UPK1AO00322 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UPK1AO00322 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1AO00322 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1AO00322 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms