Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
LINC01548A6NM66 AC112497.1-201ENST00000624824 639 ntBASIC14.69□□□□□ -0.06
LINC01548A6NM66 AL031432.5-201ENST00000641059 760 ntBASIC14.69□□□□□ -0.06
LINC01548A6NM66 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
LINC01548A6NM66 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01548A6NM66 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01548A6NM66 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01548A6NM66 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
LINC01548A6NM66 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01548A6NM66 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01548A6NM66 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01548A6NM66 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01548A6NM66 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01548A6NM66 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01548A6NM66 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01548A6NM66 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01548A6NM66 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 BX323043.1-201ENST00000641006 1765 ntBASIC14.68□□□□□ -0.06
LINC01548A6NM66 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 AC034236.2-201ENST00000606662 1610 ntBASIC14.68□□□□□ -0.06
LINC01548A6NM66 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 AC063952.2-201ENST00000498792 1227 ntBASIC14.68□□□□□ -0.06
LINC01548A6NM66 NTF6B-201ENST00000591913 560 ntBASIC14.68□□□□□ -0.06
LINC01548A6NM66 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC01548A6NM66 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 AC005082.1-201ENST00000413042 2259 ntBASIC14.68□□□□□ -0.06
LINC01548A6NM66 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01548A6NM66 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 KRT18P38-201ENST00000449496 1282 ntBASIC14.67□□□□□ -0.06
LINC01548A6NM66 AL359075.1-203ENST00000462729 1002 ntBASIC14.67□□□□□ -0.06
LINC01548A6NM66 SEC1P-202ENST00000473944 940 ntBASIC14.67□□□□□ -0.06
LINC01548A6NM66 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC01548A6NM66 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01548A6NM66 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LINC01548A6NM66 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LINC01548A6NM66 ANO7L1-203ENST00000602586 1720 ntBASIC14.66□□□□□ -0.06
LINC01548A6NM66 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
LINC01548A6NM66 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 AL031598.1-201ENST00000561511 1773 ntBASIC14.66□□□□□ -0.06
LINC01548A6NM66 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01548A6NM66 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01548A6NM66 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01548A6NM66 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms