Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 PCDHA12-202ENST00000613593 2588 ntBASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 GNAS-203ENST00000306120 1878 ntBASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 AC009053.2-201ENST00000563701 2365 ntBASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 KRT18P16-201ENST00000510337 1294 ntBASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MEIS3P1A6NDR6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 CROCCP1-201ENST00000426910 5675 ntBASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MEIS3P1A6NDR6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
MEIS3P1A6NDR6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MEIS3P1A6NDR6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
MEIS3P1A6NDR6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
MEIS3P1A6NDR6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 HEIH-201ENST00000623091 1652 ntBASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MEIS3P1A6NDR6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms