Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV3S1A0A5B6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 KRT18P5-201ENST00000436075 1291 ntBASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 MYLKP1-201ENST00000509077 1580 ntBASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV3S1A0A5B6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 AL096828.2-201ENST00000567259 1965 ntBASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 AL121832.2-201ENST00000610979 668 ntBASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV3S1A0A5B6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 KRT8P3-201ENST00000519669 1449 ntBASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 POU5F1P3-201ENST00000428824 1078 ntBASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms