Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 MIR638-201ENST00000385237 100 ntBASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 AC133552.2-202ENST00000575694 574 ntBASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 AL357033.4-201ENST00000617703 1807 ntBASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRDV1A0A1B0GX56 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRDV1A0A1B0GX56 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 AL121829.2-201ENST00000620908 328 ntBASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TRDV1A0A1B0GX56 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms