Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 AC142086.2-201ENST00000569753 217 ntBASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 AC092368.3-202ENST00000574180 1591 ntBASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 SIRPAP1-201ENST00000448467 1770 ntBASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 HLA-B-256ENST00000639848 1089 ntBASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-6A0A0B4J262 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 AC060766.5-201ENST00000590539 871 ntBASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 WIZP1-201ENST00000531444 2299 ntBASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-6A0A0B4J262 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms