Protein–RNA interactions for Protein: Q9Y6U7

RNF215, RING finger protein 215, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF215Q9Y6U7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF215Q9Y6U7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF215Q9Y6U7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF215Q9Y6U7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF215Q9Y6U7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF215Q9Y6U7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF215Q9Y6U7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF215Q9Y6U7 HOXB1-202ENST00000577092 1414 ntBASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 TSSC2-201ENST00000450217 709 ntBASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 BX276092.5-203ENST00000456199 560 ntBASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 AL121672.3-201ENST00000608644 468 ntBASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 AFG3L1P-217ENST00000557444 2447 ntBASIC18.06■□□□□ 0.48
RNF215Q9Y6U7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 AC016734.2-201ENST00000624325 1377 ntBASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF215Q9Y6U7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 AC092329.2-201ENST00000598402 547 ntBASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 AC018445.3-201ENST00000624177 1945 ntBASIC18.04■□□□□ 0.48
RNF215Q9Y6U7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 AC087289.5-201ENST00000586076 3175 ntBASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RNF215Q9Y6U7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms