Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCFC2Q9Y5Z7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 MINOS1P3-201ENST00000457048 203 ntBASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 AP001005.1-201ENST00000571755 1248 ntBASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 KRT89P-201ENST00000620027 1478 ntBASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
HCFC2Q9Y5Z7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 PMS2P1-201ENST00000431037 1228 ntBASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 AC011840.4-201ENST00000578471 627 ntBASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 AF228730.7-201ENST00000641842 219 ntBASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 IL9RP2-201ENST00000423948 1312 ntBASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCFC2Q9Y5Z7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 LINC01521-201ENST00000504184 1943 ntBASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 AC117500.6-201ENST00000624871 588 ntBASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCFC2Q9Y5Z7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCFC2Q9Y5Z7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms