Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 SLC25A1P4-201ENST00000567977 778 ntBASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 Z99916.2-201ENST00000604037 246 ntBASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 BICD1-207ENST00000551848 1962 ntBASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA11Q9Y5H2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA11Q9Y5H2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA11Q9Y5H2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA11Q9Y5H2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PCDHGA11Q9Y5H2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA11Q9Y5H2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 AC097488.1-201ENST00000507834 756 ntBASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 AC026471.5-201ENST00000615068 467 ntBASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA11Q9Y5H2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 MFAP1P1-201ENST00000442257 1255 ntBASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 AC008550.1-201ENST00000511500 884 ntBASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 REXO1L10P-201ENST00000615707 1290 ntBASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 REXO1L12P-201ENST00000622156 912 ntBASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 AP006294.2-201ENST00000641667 209 ntBASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 AL354751.1-201ENST00000412768 1863 ntBASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 MTMR9LP-203ENST00000426597 1545 ntBASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA11Q9Y5H2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms