Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA4Q9Y5G9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 RCC2P6-201ENST00000526625 1557 ntBASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 INGX-201ENST00000359239 846 ntBASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA4Q9Y5G9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.39■□□□□ 0.54
PCDHGA4Q9Y5G9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGA4Q9Y5G9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PCDHGA4Q9Y5G9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 AL391005.1-201ENST00000623953 2435 ntBASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 AC005332.7-201ENST00000614046 2005 ntBASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 AC117947.1-201ENST00000427448 529 ntBASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGA4Q9Y5G9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 AL049812.1-201ENST00000432563 2267 ntBASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 HMGA1P5-201ENST00000412453 271 ntBASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 AC004951.3-201ENST00000418645 1148 ntBASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 SLC25A1P4-201ENST00000567977 778 ntBASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 MYC-208ENST00000641036 567 ntBASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms