Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 KRT8P41-201ENST00000533985 1514 ntBASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 KRT16P1-201ENST00000399124 1418 ntBASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 Z85996.1-201ENST00000494644 937 ntBASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 AP003071.4-201ENST00000562276 1284 ntBASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 AC026271.3-201ENST00000571884 352 ntBASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 AL031985.4-201ENST00000642138 673 ntBASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB3Q9Y5G1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGB3Q9Y5G1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGB3Q9Y5G1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PCDHGB3Q9Y5G1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGB3Q9Y5G1 AC005332.8-201ENST00000622750 2735 ntBASIC17.71■□□□□ 0.42
PCDHGB3Q9Y5G1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 AC211429.1-201ENST00000415277 523 ntBASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 AC004980.1-204ENST00000429707 299 ntBASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 TSPY23P-201ENST00000440136 739 ntBASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 PRSS44-201ENST00000515154 1146 ntBASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB3Q9Y5G1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 NUDT16P1-203ENST00000513809 620 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms