Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 CA15P1-201ENST00000481698 905 ntBASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 AC011558.1-201ENST00000623459 338 ntBASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 AC141257.4-201ENST00000634557 245 ntBASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 AC136944.6-201ENST00000634818 245 ntBASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB1Q9Y5F3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 PCED1CP-201ENST00000419887 785 ntBASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 AC010653.2-201ENST00000623505 997 ntBASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 AC092338.2-201ENST00000568827 1415 ntBASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB1Q9Y5F3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 AC093458.2-201ENST00000623150 629 ntBASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 ANO7L1-203ENST00000602586 1720 ntBASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB1Q9Y5F3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 KRT18P48-201ENST00000434763 852 ntBASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 FAM86EP-206ENST00000510506 987 ntBASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB1Q9Y5F3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms