Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FNDC3AQ9Y2H6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.05■□□□□ 0.64
FNDC3AQ9Y2H6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
FNDC3AQ9Y2H6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FNDC3AQ9Y2H6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FNDC3AQ9Y2H6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.05■□□□□ 0.64
FNDC3AQ9Y2H6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 TSPY21P-201ENST00000433481 731 ntBASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 KRT126P-201ENST00000549467 1181 ntBASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FNDC3AQ9Y2H6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 PCED1CP-201ENST00000419887 785 ntBASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 TSPY17P-201ENST00000450329 467 ntBASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 FAM86EP-206ENST00000510506 987 ntBASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 AL121956.5-201ENST00000625261 221 ntBASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.03■□□□□ 0.64
FNDC3AQ9Y2H6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FNDC3AQ9Y2H6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
FNDC3AQ9Y2H6 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.02■□□□□ 0.63
FNDC3AQ9Y2H6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
FNDC3AQ9Y2H6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.02■□□□□ 0.63
FNDC3AQ9Y2H6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
FNDC3AQ9Y2H6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FNDC3AQ9Y2H6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FNDC3AQ9Y2H6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FNDC3AQ9Y2H6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.01■□□□□ 0.63
FNDC3AQ9Y2H6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
FNDC3AQ9Y2H6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms