Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 AC112482.1-201ENST00000492080 688 ntBASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 AC134684.3-201ENST00000641758 218 ntBASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 AP005212.1-201ENST00000581547 1997 ntBASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 RNF165-205ENST00000588679 2904 ntBASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 RPS8P6-201ENST00000426177 609 ntBASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
ZC3H4Q9UPT8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
ZC3H4Q9UPT8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 AC004832.2-201ENST00000426397 482 ntBASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 KRT18P3-201ENST00000451602 1288 ntBASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
ZC3H4Q9UPT8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 HTR5BP-201ENST00000430851 1154 ntBASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 Z83851.2-201ENST00000609564 659 ntBASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3H4Q9UPT8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 AP006288.1-201ENST00000446065 395 ntBASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3H4Q9UPT8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms