Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 KRT8P50-201ENST00000562022 1438 ntBASIC19.7■□□□□ 0.74
CDH9Q9ULB4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 AC092597.1-201ENST00000487352 616 ntBASIC19.7■□□□□ 0.74
CDH9Q9ULB4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH9Q9ULB4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 AL136038.3-201ENST00000561909 1096 ntBASIC19.69■□□□□ 0.74
CDH9Q9ULB4 AL358472.4-201ENST00000633140 710 ntBASIC19.69■□□□□ 0.74
CDH9Q9ULB4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH9Q9ULB4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 AC009065.1-201ENST00000564055 1225 ntBASIC19.68■□□□□ 0.74
CDH9Q9ULB4 AC091076.1-201ENST00000610741 619 ntBASIC19.68■□□□□ 0.74
CDH9Q9ULB4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 AC079602.3-201ENST00000623931 403 ntBASIC19.68■□□□□ 0.74
CDH9Q9ULB4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDH9Q9ULB4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH9Q9ULB4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms