Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
HDAC6Q9UBN7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC6Q9UBN7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HDAC6Q9UBN7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 GPAT2P1-201ENST00000444924 1672 ntBASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 SPDYE13P-201ENST00000445314 798 ntBASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HDAC6Q9UBN7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDAC6Q9UBN7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC6Q9UBN7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 CLEC4GP1-201ENST00000596555 870 ntBASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms