Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UBP1Q9NZI7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19■□□□□ 0.63
UBP1Q9NZI7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19■□□□□ 0.63
UBP1Q9NZI7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19■□□□□ 0.63
UBP1Q9NZI7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19■□□□□ 0.63
UBP1Q9NZI7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19■□□□□ 0.63
UBP1Q9NZI7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19■□□□□ 0.63
UBP1Q9NZI7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UBP1Q9NZI7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 CYP2D8P-201ENST00000433633 1490 ntBASIC18.99■□□□□ 0.63
UBP1Q9NZI7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 CA15P1-201ENST00000481698 905 ntBASIC18.99■□□□□ 0.63
UBP1Q9NZI7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 MIR4674-201ENST00000582457 87 ntBASIC18.99■□□□□ 0.63
UBP1Q9NZI7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBP1Q9NZI7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.98■□□□□ 0.63
UBP1Q9NZI7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 INGX-201ENST00000359239 846 ntBASIC18.97■□□□□ 0.63
UBP1Q9NZI7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms