Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 POU5F1P3-201ENST00000428824 1078 ntBASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 CD99P1-205ENST00000527459 561 ntBASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 MYC-208ENST00000641036 567 ntBASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 AC009113.1-201ENST00000570267 2443 ntBASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 KRT8P11-201ENST00000409686 1436 ntBASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP1Q9NZI2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 HEIH-201ENST00000623091 1652 ntBASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 AC004951.3-201ENST00000418645 1148 ntBASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 AC004980.1-204ENST00000429707 299 ntBASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 AC128676.1-201ENST00000454392 318 ntBASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 AL031985.4-201ENST00000642138 673 ntBASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 KRT16P1-201ENST00000399124 1418 ntBASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP1Q9NZI2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 CR392000.1-201ENST00000624770 1228 ntBASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
KCNIP1Q9NZI2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP1Q9NZI2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP1Q9NZI2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP1Q9NZI2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms