Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.43■□□□□ 0.54
MKS1Q9NXB0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 AC142086.2-201ENST00000569753 217 ntBASIC18.42■□□□□ 0.54
MKS1Q9NXB0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 AC131212.4-201ENST00000623606 975 ntBASIC18.42■□□□□ 0.54
MKS1Q9NXB0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MKS1Q9NXB0 AC020763.4-201ENST00000623414 4170 ntBASIC18.42■□□□□ 0.54
MKS1Q9NXB0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 AL109659.2-201ENST00000606809 1674 ntBASIC18.41■□□□□ 0.54
MKS1Q9NXB0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 AC069544.1-201ENST00000609399 999 ntBASIC18.41■□□□□ 0.54
MKS1Q9NXB0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MKS1Q9NXB0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 AP000593.1-201ENST00000393668 712 ntBASIC18.4■□□□□ 0.54
MKS1Q9NXB0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms