Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 YBX1P10-201ENST00000444752 975 ntBASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 RN7SL471P-201ENST00000580476 299 ntBASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 ITM2C-210ENST00000620962 501 ntBASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 ANO7L1-203ENST00000602586 1720 ntBASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCF3Q9NUQ8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 AL158047.1-201ENST00000445918 881 ntBASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 IRX1P1-201ENST00000438849 1838 ntBASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ABCF3Q9NUQ8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 PKD1P1-201ENST00000458669 6805 ntBASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 TUBB8P6-201ENST00000436895 1288 ntBASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms