Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC126763.1-201ENST00000552015 2118 ntBASIC19.87■□□□□ 0.77
CISHQ9NSE2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.86■□□□□ 0.77
CISHQ9NSE2 MYC-208ENST00000641036 567 ntBASIC19.86■□□□□ 0.77
CISHQ9NSE2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.86■□□□□ 0.77
CISHQ9NSE2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CISHQ9NSE2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 KRT8P50-201ENST00000562022 1438 ntBASIC19.85■□□□□ 0.77
CISHQ9NSE2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 NEK4P2-201ENST00000580004 1012 ntBASIC19.85■□□□□ 0.77
CISHQ9NSE2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 AC112497.1-201ENST00000624824 639 ntBASIC19.85■□□□□ 0.77
CISHQ9NSE2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.85■□□□□ 0.77
CISHQ9NSE2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CISHQ9NSE2 KRT8P7-201ENST00000533003 1432 ntBASIC19.85■□□□□ 0.77
CISHQ9NSE2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.85■□□□□ 0.77
CISHQ9NSE2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CISHQ9NSE2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.84■□□□□ 0.77
CISHQ9NSE2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms