Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 AL603756.1-201ENST00000606511 2163 ntBASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 AL512353.2-201ENST00000448759 1962 ntBASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42SE1Q9NRR8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms