Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 TSPY20P-201ENST00000450910 630 ntBASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 FAM201B-201ENST00000458407 597 ntBASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 AC130371.2-201ENST00000619443 611 ntBASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 NOC2LP1-202ENST00000452600 2235 ntBASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 RCC2P3-201ENST00000418112 1537 ntBASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LRTM1Q9HBL6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 AC011506.1-201ENST00000474329 610 ntBASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.95■□□□□ 0.46
LRTM1Q9HBL6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 MIR6786-201ENST00000616843 113 ntBASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRTM1Q9HBL6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 KRT8P45-201ENST00000414328 1447 ntBASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 B3GAT3P1-201ENST00000471720 806 ntBASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 FAM197Y4-202ENST00000622692 608 ntBASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms