Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC026185.1-201ENST00000445748 174 ntBASIC22.9■■□□□ 1.26
UPF2Q9HAU5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 RARRES2P6-201ENST00000567333 442 ntBASIC22.9■■□□□ 1.26
UPF2Q9HAU5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.9■■□□□ 1.26
UPF2Q9HAU5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
UPF2Q9HAU5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
UPF2Q9HAU5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
UPF2Q9HAU5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
UPF2Q9HAU5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
UPF2Q9HAU5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
UPF2Q9HAU5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
UPF2Q9HAU5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
UPF2Q9HAU5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 AC060766.5-201ENST00000590539 871 ntBASIC22.89■■□□□ 1.25
UPF2Q9HAU5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.89■■□□□ 1.25
UPF2Q9HAU5 RCC2P6-201ENST00000526625 1557 ntBASIC22.89■■□□□ 1.25
UPF2Q9HAU5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.88■■□□□ 1.25
UPF2Q9HAU5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
UPF2Q9HAU5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 CDCA4P2-201ENST00000441182 718 ntBASIC22.87■■□□□ 1.25
UPF2Q9HAU5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 AC097658.1-201ENST00000475555 843 ntBASIC22.87■■□□□ 1.25
UPF2Q9HAU5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 AL121832.2-201ENST00000610979 668 ntBASIC22.87■■□□□ 1.25
UPF2Q9HAU5 MIR5787-201ENST00000611784 55 ntBASIC22.87■■□□□ 1.25
UPF2Q9HAU5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
UPF2Q9HAU5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 AL499627.1-201ENST00000569373 2188 ntBASIC22.86■■□□□ 1.25
UPF2Q9HAU5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms