Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 KRT8P32-201ENST00000512863 1461 ntBASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 AC004980.1-204ENST00000429707 299 ntBASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 KSR1P1-201ENST00000446298 240 ntBASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 KRT18P6-201ENST00000555540 1265 ntBASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 RN7SL471P-201ENST00000580476 299 ntBASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
POLR2J3Q9H1A7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 ESRRAP1-201ENST00000400596 1257 ntBASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 AC026271.3-201ENST00000571884 352 ntBASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
POLR2J3Q9H1A7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 AP002982.1-201ENST00000492365 877 ntBASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms