Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.86■□□□□ 0.93
CCSER1Q9C0I3 KRT8P7-201ENST00000533003 1432 ntBASIC20.86■□□□□ 0.93
CCSER1Q9C0I3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.86■□□□□ 0.93
CCSER1Q9C0I3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCSER1Q9C0I3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCSER1Q9C0I3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 AL162741.1-201ENST00000565563 1558 ntBASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCSER1Q9C0I3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCSER1Q9C0I3 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCSER1Q9C0I3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCSER1Q9C0I3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCSER1Q9C0I3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCSER1Q9C0I3 AL354751.1-201ENST00000412768 1863 ntBASIC20.83■□□□□ 0.92
CCSER1Q9C0I3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCSER1Q9C0I3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCSER1Q9C0I3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCSER1Q9C0I3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 FAM87A-204ENST00000613235 858 ntBASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms