Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 LINC00543-201ENST00000567234 1845 ntBASIC3.98□□□□□ -1.77
KRTAP4-4Q9BYR3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 HLA-A-201ENST00000376802 1334 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AC104446.1-201ENST00000613728 1321 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 NUDT4-204ENST00000547014 1419 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 RN7SKP133-201ENST00000364845 340 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 RNY3P14-201ENST00000384309 102 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 ALKAL2-203ENST00000401503 748 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 RN7SKP65-201ENST00000410278 313 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 RN7SKP106-201ENST00000410832 272 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AC138393.2-201ENST00000414742 246 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AC004911.1-201ENST00000416316 871 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CCDC58P2-201ENST00000417131 366 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 RPL5P28-201ENST00000418634 693 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 MTCO2P21-201ENST00000419780 677 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 FAM104B-203ENST00000425133 1229 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 LINC01823-203ENST00000435895 766 ntTSL 3 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 PSMD10P1-201ENST00000436861 681 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 HSFY3P-201ENST00000444242 1191 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AL096829.2-201ENST00000446582 742 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 RPS3AP46-201ENST00000448352 682 ntBASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms