Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 NIFKP9-201ENST00000419265 221 ntBASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC090192.1-201ENST00000517740 490 ntBASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 PCDHB18P-201ENST00000524813 2368 ntBASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHANK2-AS3Q9BTD1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC133681.1-201ENST00000465482 601 ntBASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC124016.1-201ENST00000609552 612 ntBASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC110285.5-201ENST00000611501 352 ntBASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SHANK2-AS3Q9BTD1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 AP002982.1-201ENST00000492365 877 ntBASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 AL353708.3-201ENST00000610272 989 ntBASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC092666.2-201ENST00000613287 246 ntBASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms