Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.18■□□□□ 0.5
EBF4Q9BQW3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 RARRES2P6-201ENST00000567333 442 ntBASIC18.18■□□□□ 0.5
EBF4Q9BQW3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 MYC-209ENST00000641252 345 ntBASIC18.18■□□□□ 0.5
EBF4Q9BQW3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 KRT8P32-201ENST00000512863 1461 ntBASIC18.18■□□□□ 0.5
EBF4Q9BQW3 AL357033.4-201ENST00000617703 1807 ntBASIC18.18■□□□□ 0.5
EBF4Q9BQW3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EBF4Q9BQW3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AC080080.1-201ENST00000625121 2420 ntBASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AC060766.5-201ENST00000590539 871 ntBASIC18.17■□□□□ 0.5
EBF4Q9BQW3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AL645608.8-201ENST00000606034 2086 ntBASIC18.17■□□□□ 0.5
EBF4Q9BQW3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.17■□□□□ 0.5
EBF4Q9BQW3 AC008556.1-201ENST00000610908 2040 ntBASIC18.16■□□□□ 0.5
EBF4Q9BQW3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 KRT8P45-201ENST00000414328 1447 ntBASIC18.16■□□□□ 0.5
EBF4Q9BQW3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.16■□□□□ 0.5
EBF4Q9BQW3 AC026185.1-201ENST00000445748 174 ntBASIC18.16■□□□□ 0.5
EBF4Q9BQW3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 SOX15-203ENST00000570788 1093 ntBASIC18.16■□□□□ 0.5
EBF4Q9BQW3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 AC008687.6-201ENST00000596318 630 ntBASIC18.16■□□□□ 0.5
EBF4Q9BQW3 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.16■□□□□ 0.5
EBF4Q9BQW3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.16■□□□□ 0.5
EBF4Q9BQW3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 AC112777.1-201ENST00000540175 1423 ntBASIC18.15■□□□□ 0.5
EBF4Q9BQW3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms