Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 CNN2P2-201ENST00000443536 909 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 CNN2P3-201ENST00000450201 906 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ACA64.2-201ENST00000459014 129 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AL136317.3-201ENST00000618497 906 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 TMEM261P1-201ENST00000604899 340 ntBASIC5.66□□□□□ -1.5
HMCN1Q96RW7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AC092506.1-202ENST00000401022 528 ntBASIC5.66□□□□□ -1.5
HMCN1Q96RW7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AL662799.1-202ENST00000614205 422 ntBASIC5.66□□□□□ -1.5
HMCN1Q96RW7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AC073621.1-201ENST00000392730 636 ntBASIC5.66□□□□□ -1.5
HMCN1Q96RW7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 HCG4B-203ENST00000450128 991 ntBASIC5.66□□□□□ -1.5
HMCN1Q96RW7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 MIR3180-5-201ENST00000583743 153 ntBASIC5.66□□□□□ -1.5
HMCN1Q96RW7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 DPP3P2-201ENST00000416030 1696 ntBASIC5.66□□□□□ -1.5
HMCN1Q96RW7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMCN1Q96RW7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 AC092978.1-202ENST00000637590 1327 ntBASIC5.65□□□□□ -1.5
HMCN1Q96RW7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 HAUS4P1-201ENST00000406739 1145 ntBASIC5.65□□□□□ -1.5
HMCN1Q96RW7 KRT17P7-201ENST00000451704 1104 ntBASIC5.65□□□□□ -1.5
HMCN1Q96RW7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 AC068587.9-201ENST00000641814 219 ntBASIC5.65□□□□□ -1.5
HMCN1Q96RW7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms