Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 MTDHP5-201ENST00000598980 586 ntBASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNTNAP3BQ96NU0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 AC022494.1-201ENST00000466044 728 ntBASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 AC190387.1-201ENST00000551683 408 ntBASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 AP002472.1-201ENST00000577490 586 ntBASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 AF228730.6-201ENST00000641497 218 ntBASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 AC084121.3-201ENST00000641716 218 ntBASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 AC105233.6-201ENST00000642093 218 ntBASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP3BQ96NU0 KRT8P41-201ENST00000533985 1514 ntBASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 AC023274.1-201ENST00000418278 595 ntBASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 VENTXP7-201ENST00000475503 772 ntBASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 RNA5SP416-201ENST00000516838 111 ntBASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 AP005901.3-202ENST00000581653 237 ntBASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 Z83851.2-201ENST00000609564 659 ntBASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP3BQ96NU0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP3BQ96NU0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 LINC01465-201ENST00000408887 1940 ntBASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNTNAP3BQ96NU0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms