Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00477Q96M19 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC00477Q96M19 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
LINC00477Q96M19 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LINC00477Q96M19 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 AC126763.1-201ENST00000552015 2118 ntBASIC13.99□□□□□ -0.17
LINC00477Q96M19 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 AC004951.3-201ENST00000418645 1148 ntBASIC13.99□□□□□ -0.17
LINC00477Q96M19 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 AL353807.1-201ENST00000427475 662 ntBASIC13.99□□□□□ -0.17
LINC00477Q96M19 AC004980.1-204ENST00000429707 299 ntBASIC13.99□□□□□ -0.17
LINC00477Q96M19 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 RN7SL471P-201ENST00000580476 299 ntBASIC13.99□□□□□ -0.17
LINC00477Q96M19 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 MTMR9LP-203ENST00000426597 1545 ntBASIC13.99□□□□□ -0.17
LINC00477Q96M19 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LINC00477Q96M19 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00477Q96M19 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 ID1-201ENST00000376105 1233 ntBASIC13.98□□□□□ -0.17
LINC00477Q96M19 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 ESRRAP1-201ENST00000400596 1257 ntBASIC13.98□□□□□ -0.17
LINC00477Q96M19 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.98□□□□□ -0.17
LINC00477Q96M19 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 AC233263.1-201ENST00000578059 224 ntBASIC13.98□□□□□ -0.17
LINC00477Q96M19 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LINC00477Q96M19 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00477Q96M19 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms