Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPG11Q96JI7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.79■□□□□ 0.12
SPG11Q96JI7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 AC011840.4-201ENST00000578471 627 ntBASIC15.78■□□□□ 0.12
SPG11Q96JI7 AC024563.2-201ENST00000603282 481 ntBASIC15.78■□□□□ 0.12
SPG11Q96JI7 AC124864.1-201ENST00000623408 392 ntBASIC15.78■□□□□ 0.12
SPG11Q96JI7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 KRT8P7-201ENST00000533003 1432 ntBASIC15.78■□□□□ 0.12
SPG11Q96JI7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 TREX1-205ENST00000625293 1783 ntBASIC15.78■□□□□ 0.12
SPG11Q96JI7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 AC020907.5-201ENST00000624372 1936 ntBASIC15.78■□□□□ 0.12
SPG11Q96JI7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.78■□□□□ 0.12
SPG11Q96JI7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPG11Q96JI7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 AC008556.1-201ENST00000610908 2040 ntBASIC15.77■□□□□ 0.12
SPG11Q96JI7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.77■□□□□ 0.12
SPG11Q96JI7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
SPG11Q96JI7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
SPG11Q96JI7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.77■□□□□ 0.12
SPG11Q96JI7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.77■□□□□ 0.12
SPG11Q96JI7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.77■□□□□ 0.12
SPG11Q96JI7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPG11Q96JI7 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.77■□□□□ 0.12
SPG11Q96JI7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SPG11Q96JI7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.77■□□□□ 0.11
SPG11Q96JI7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
SPG11Q96JI7 AC244107.1-201ENST00000442033 332 ntBASIC15.77■□□□□ 0.11
SPG11Q96JI7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.77■□□□□ 0.11
SPG11Q96JI7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.77■□□□□ 0.11
SPG11Q96JI7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SPG11Q96JI7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPG11Q96JI7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms