Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 AC010331.1-201ENST00000611423 582 ntBASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VCPIP1Q96JH7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 CCR12P-201ENST00000446203 998 ntBASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 MIR4674-201ENST00000582457 87 ntBASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 ABALON-201ENST00000629058 1903 ntBASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCPIP1Q96JH7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 AC092338.2-201ENST00000568827 1415 ntBASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 AP000525.1-201ENST00000608286 694 ntBASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VCPIP1Q96JH7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 KRT8P7-201ENST00000533003 1432 ntBASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms