Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HPS1Q92902 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HPS1Q92902 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.02■□□□□ 0.32
HPS1Q92902 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HPS1Q92902 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HPS1Q92902 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.02■□□□□ 0.32
HPS1Q92902 AC008550.1-201ENST00000511500 884 ntBASIC17.02■□□□□ 0.32
HPS1Q92902 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 SOX15-203ENST00000570788 1093 ntBASIC17.02■□□□□ 0.32
HPS1Q92902 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.02■□□□□ 0.32
HPS1Q92902 RN7SL471P-201ENST00000580476 299 ntBASIC17.02■□□□□ 0.32
HPS1Q92902 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.02■□□□□ 0.32
HPS1Q92902 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
HPS1Q92902 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HPS1Q92902 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPS1Q92902 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPS1Q92902 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPS1Q92902 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.02■□□□□ 0.31
HPS1Q92902 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPS1Q92902 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HPS1Q92902 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HPS1Q92902 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
HPS1Q92902 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HPS1Q92902 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.01■□□□□ 0.31
HPS1Q92902 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
HPS1Q92902 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.01■□□□□ 0.31
HPS1Q92902 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.01■□□□□ 0.31
HPS1Q92902 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.01■□□□□ 0.31
HPS1Q92902 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HPS1Q92902 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.01■□□□□ 0.31
HPS1Q92902 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.01■□□□□ 0.31
HPS1Q92902 RPPH1-201ENST00000516869 333 ntBASIC17.01■□□□□ 0.31
HPS1Q92902 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HPS1Q92902 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
HPS1Q92902 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HPS1Q92902 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS1Q92902 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HPS1Q92902 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17■□□□□ 0.31
HPS1Q92902 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17■□□□□ 0.31
HPS1Q92902 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17■□□□□ 0.31
HPS1Q92902 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17■□□□□ 0.31
HPS1Q92902 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17■□□□□ 0.31
HPS1Q92902 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 HLA-G-202ENST00000376815 851 ntBASIC17■□□□□ 0.31
HPS1Q92902 HLA-G-203ENST00000376818 1127 ntBASIC17■□□□□ 0.31
HPS1Q92902 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17■□□□□ 0.31
HPS1Q92902 AL390719.1-204ENST00000412397 1219 ntBASIC17■□□□□ 0.31
HPS1Q92902 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HPS1Q92902 POM121L13P-201ENST00000422362 380 ntBASIC17■□□□□ 0.31
HPS1Q92902 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 SLC29A4P2-201ENST00000504749 1089 ntBASIC17■□□□□ 0.31
HPS1Q92902 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17■□□□□ 0.31
HPS1Q92902 C1QBPP2-201ENST00000528754 825 ntBASIC17■□□□□ 0.31
HPS1Q92902 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17■□□□□ 0.31
HPS1Q92902 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HPS1Q92902 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS1Q92902 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17■□□□□ 0.31
HPS1Q92902 NIFKP4-201ENST00000567275 1192 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms