Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 AL359075.1-203ENST00000462729 1002 ntBASIC17.59■□□□□ 0.41
TM9SF4Q92544 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 AL023973.1-201ENST00000624619 620 ntBASIC17.59■□□□□ 0.41
TM9SF4Q92544 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TM9SF4Q92544 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF4Q92544 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.59■□□□□ 0.41
TM9SF4Q92544 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.41
TM9SF4Q92544 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.58■□□□□ 0.41
TM9SF4Q92544 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
TM9SF4Q92544 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TM9SF4Q92544 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF4Q92544 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF4Q92544 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TM9SF4Q92544 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TM9SF4Q92544 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF4Q92544 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF4Q92544 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF4Q92544 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF4Q92544 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF4Q92544 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF4Q92544 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF4Q92544 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF4Q92544 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 AL049812.1-201ENST00000432563 2267 ntBASIC17.58■□□□□ 0.4
TM9SF4Q92544 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF4Q92544 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 KRT18P56-201ENST00000507275 550 ntBASIC17.57■□□□□ 0.4
TM9SF4Q92544 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.57■□□□□ 0.4
TM9SF4Q92544 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF4Q92544 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms