Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 AL353692.3-201ENST00000407031 1396 ntBASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 Z98044.1-201ENST00000632503 1764 ntBASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 FICD-205ENST00000552758 603 ntTSL 2 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 KRT89P-201ENST00000620027 1478 ntBASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.42■■□□□ 1.5
RAPGEF4Q8WZA2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 NSUN5P1-202ENST00000421140 1535 ntBASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 NSUN5P2-203ENST00000457352 1529 ntBASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 AL662844.1-201ENST00000546340 181 ntBASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RAPGEF4Q8WZA2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 AP005901.3-202ENST00000581653 237 ntBASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.4■■□□□ 1.5
RAPGEF4Q8WZA2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
RAPGEF4Q8WZA2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RAPGEF4Q8WZA2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
RAPGEF4Q8WZA2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RAPGEF4Q8WZA2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RAPGEF4Q8WZA2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 AC079776.4-201ENST00000511039 504 ntBASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF4Q8WZA2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 KRT8P50-201ENST00000562022 1438 ntBASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 AKR1C7P-201ENST00000305623 895 ntBASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 MRPL3P1-201ENST00000400109 1033 ntBASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 ABR-217ENST00000572441 563 ntTSL 4 BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms