Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 MIR4674-201ENST00000582457 87 ntBASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 AC116562.4-202ENST00000641738 218 ntBASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SHROOM3Q8TF72 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 CYP51A1P1-201ENST00000492267 1507 ntBASIC19■□□□□ 0.63
SHROOM3Q8TF72 HOXB1-202ENST00000577092 1414 ntBASIC19■□□□□ 0.63
SHROOM3Q8TF72 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 SLC25A1P2-201ENST00000430693 912 ntBASIC19■□□□□ 0.63
SHROOM3Q8TF72 NMU-205ENST00000511469 756 ntTSL 3 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM3Q8TF72 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SHROOM3Q8TF72 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 TERF1P1-201ENST00000311003 1181 ntBASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 AC073508.3-201ENST00000619697 1419 ntBASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 AL359075.1-203ENST00000462729 1002 ntBASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 SEC1P-202ENST00000473944 940 ntBASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM3Q8TF72 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 AC092338.2-201ENST00000568827 1415 ntBASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 AC087388.1-201ENST00000571370 1112 ntBASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms