Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 AL390961.4-201ENST00000623958 2535 ntBASIC19.98■□□□□ 0.79
LMO3Q8TAP4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 ECEL1P2-202ENST00000465689 757 ntBASIC19.98■□□□□ 0.79
LMO3Q8TAP4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.97■□□□□ 0.79
LMO3Q8TAP4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LMO3Q8TAP4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 AL162741.1-201ENST00000565563 1558 ntBASIC19.96■□□□□ 0.79
LMO3Q8TAP4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 AC007613.1-201ENST00000572811 2597 ntBASIC19.96■□□□□ 0.79
LMO3Q8TAP4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.96■□□□□ 0.79
LMO3Q8TAP4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 ESPNP-201ENST00000270691 2015 ntBASIC19.95■□□□□ 0.78
LMO3Q8TAP4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 AC135776.1-201ENST00000319817 2481 ntBASIC19.95■□□□□ 0.78
LMO3Q8TAP4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 AC087499.1-201ENST00000418141 1075 ntBASIC19.95■□□□□ 0.78
LMO3Q8TAP4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 AC128688.1-201ENST00000487626 519 ntBASIC19.95■□□□□ 0.78
LMO3Q8TAP4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LMO3Q8TAP4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms