Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 AC004951.3-201ENST00000418645 1148 ntBASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 AC008040.2-201ENST00000461049 708 ntBASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 PRSS44-201ENST00000515154 1146 ntBASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 AL353708.3-201ENST00000610272 989 ntBASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 AC011298.2-201ENST00000617989 482 ntBASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLHC1Q8NHS4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 KRT8P32-201ENST00000512863 1461 ntBASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 AC073592.3-201ENST00000625118 1834 ntBASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLHC1Q8NHS4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 AF186192.3-201ENST00000583427 947 ntBASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 LETM1P2-201ENST00000597330 2178 ntBASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLHC1Q8NHS4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.89■□□□□ 0.46
CLHC1Q8NHS4 KRT8P3-201ENST00000519669 1449 ntBASIC17.89■□□□□ 0.46
CLHC1Q8NHS4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.89■□□□□ 0.46
CLHC1Q8NHS4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.89■□□□□ 0.46
CLHC1Q8NHS4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms