Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAM1L1Q8N609 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TRAM1L1Q8N609 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAM1L1Q8N609 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAM1L1Q8N609 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 AL049597.2-201ENST00000565575 961 ntBASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 MIR3180-4-201ENST00000582223 153 ntBASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAM1L1Q8N609 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 AC034232.1-201ENST00000506026 1064 ntBASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 AC022616.7-201ENST00000525383 220 ntBASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 LINC01238-205ENST00000567549 1107 ntBASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 AC010240.3-201ENST00000607688 395 ntBASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAM1L1Q8N609 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 FAM8A6P-201ENST00000407496 1135 ntBASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 AC092647.4-201ENST00000457211 535 ntBASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 MIR3917-201ENST00000580971 93 ntBASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAM1L1Q8N609 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms