Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SIX5Q8N196 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.06■□□□□ 0.64
SIX5Q8N196 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 FAM220CP-201ENST00000395253 831 ntBASIC19.06■□□□□ 0.64
SIX5Q8N196 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
SIX5Q8N196 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.06■□□□□ 0.64
SIX5Q8N196 VENTXP7-201ENST00000475503 772 ntBASIC19.06■□□□□ 0.64
SIX5Q8N196 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 GUSBP12-201ENST00000513727 720 ntBASIC19.06■□□□□ 0.64
SIX5Q8N196 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.06■□□□□ 0.64
SIX5Q8N196 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.06■□□□□ 0.64
SIX5Q8N196 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.06■□□□□ 0.64
SIX5Q8N196 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SIX5Q8N196 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.06■□□□□ 0.64
SIX5Q8N196 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX5Q8N196 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.06■□□□□ 0.64
SIX5Q8N196 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SIX5Q8N196 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SIX5Q8N196 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.05■□□□□ 0.64
SIX5Q8N196 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SIX5Q8N196 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.05■□□□□ 0.64
SIX5Q8N196 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 AL031284.1-201ENST00000419297 478 ntBASIC19.05■□□□□ 0.64
SIX5Q8N196 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.05■□□□□ 0.64
SIX5Q8N196 AC104390.1-201ENST00000555663 520 ntBASIC19.05■□□□□ 0.64
SIX5Q8N196 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SIX5Q8N196 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX5Q8N196 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX5Q8N196 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.04■□□□□ 0.64
SIX5Q8N196 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX5Q8N196 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX5Q8N196 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.04■□□□□ 0.64
SIX5Q8N196 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.04■□□□□ 0.64
SIX5Q8N196 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX5Q8N196 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX5Q8N196 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.04■□□□□ 0.64
SIX5Q8N196 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SIX5Q8N196 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX5Q8N196 AL158211.5-201ENST00000623583 2518 ntBASIC19.04■□□□□ 0.64
SIX5Q8N196 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SIX5Q8N196 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SIX5Q8N196 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
SIX5Q8N196 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 KRT8P7-201ENST00000533003 1432 ntBASIC19.03■□□□□ 0.64
SIX5Q8N196 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.03■□□□□ 0.64
SIX5Q8N196 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 MIR940-201ENST00000401276 94 ntBASIC19.03■□□□□ 0.64
SIX5Q8N196 MINOS1P3-201ENST00000457048 203 ntBASIC19.03■□□□□ 0.64
SIX5Q8N196 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.03■□□□□ 0.64
SIX5Q8N196 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms