Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL023284.2-201ENST00000405850 579 ntBASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC116Q8IYX3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC116Q8IYX3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC116Q8IYX3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CCDC116Q8IYX3 AL109659.2-201ENST00000606809 1674 ntBASIC17.58■□□□□ 0.41
CCDC116Q8IYX3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC116Q8IYX3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 NEFHP1-201ENST00000412845 2629 ntBASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC116Q8IYX3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 AC126763.1-201ENST00000552015 2118 ntBASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 MCCD1P1-208ENST00000445732 328 ntBASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 AL023803.3-201ENST00000615559 522 ntBASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC116Q8IYX3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 AC090164.3-201ENST00000610780 2143 ntBASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 SLC25A1P2-201ENST00000430693 912 ntBASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 AL353719.1-201ENST00000566847 864 ntBASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC116Q8IYX3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms