Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 AC010203.1-204ENST00000548782 407 ntBASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 AL163051.1-201ENST00000569214 1512 ntBASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
C12orf56Q8IXR9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 AP000523.1-201ENST00000398242 1049 ntBASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 AC005363.2-201ENST00000618631 242 ntBASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
C12orf56Q8IXR9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.2■□□□□ 0.83
C12orf56Q8IXR9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.2■□□□□ 0.83
C12orf56Q8IXR9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 TERF1P1-201ENST00000311003 1181 ntBASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 LINC01023-201ENST00000606054 436 ntBASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf56Q8IXR9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf56Q8IXR9 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.18■□□□□ 0.82
C12orf56Q8IXR9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf56Q8IXR9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms