Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 AC011676.5-201ENST00000624864 2660 ntBASIC15.52■□□□□ 0.07
ZNF546Q86UE3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF546Q86UE3 AC011270.2-201ENST00000624293 2550 ntBASIC15.52■□□□□ 0.07
ZNF546Q86UE3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.52■□□□□ 0.07
ZNF546Q86UE3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
ZNF546Q86UE3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF546Q86UE3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF546Q86UE3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF546Q86UE3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF546Q86UE3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 KRT19P1-201ENST00000405746 1186 ntBASIC15.51■□□□□ 0.07
ZNF546Q86UE3 YBX1P1-201ENST00000445822 960 ntBASIC15.51■□□□□ 0.07
ZNF546Q86UE3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 AL139246.5-201ENST00000606645 996 ntBASIC15.51■□□□□ 0.07
ZNF546Q86UE3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF546Q86UE3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 AC004854.2-201ENST00000608450 1441 ntBASIC15.5■□□□□ 0.07
ZNF546Q86UE3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF546Q86UE3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 AL118508.1-201ENST00000613502 2345 ntBASIC15.49■□□□□ 0.07
ZNF546Q86UE3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 AL591742.1-201ENST00000604433 565 ntBASIC15.49■□□□□ 0.07
ZNF546Q86UE3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms