Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TUBA1AQ71U36 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.2■□□□□ 0.34
TUBA1AQ71U36 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 AC110285.5-201ENST00000611501 352 ntBASIC17.19■□□□□ 0.34
TUBA1AQ71U36 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 ESPNP-201ENST00000270691 2015 ntBASIC17.19■□□□□ 0.34
TUBA1AQ71U36 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TUBA1AQ71U36 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 MST1L-201ENST00000442552 2185 ntBASIC17.18■□□□□ 0.34
TUBA1AQ71U36 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBA1AQ71U36 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms