Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 PCDHB19P-201ENST00000570871 2371 ntBASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 FEM1AP3-201ENST00000403722 1741 ntBASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00173Q6ZV60 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC00173Q6ZV60 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 AC027612.3-201ENST00000413684 1047 ntBASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00173Q6ZV60 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00173Q6ZV60 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms