Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 AP002982.1-201ENST00000492365 877 ntBASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF111Q6ZNA4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF111Q6ZNA4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 AC008550.1-201ENST00000511500 884 ntBASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 SDHAP1-207ENST00000440850 2000 ntBASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF111Q6ZNA4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms