Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 AC010653.2-201ENST00000623505 997 ntBASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 MYLKP1-201ENST00000509077 1580 ntBASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 KRT8P50-201ENST00000562022 1438 ntBASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 WWOX-216ENST00000569818 525 ntBASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 FAM87A-204ENST00000613235 858 ntBASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSL3PQ5NE16 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 BICD1-207ENST00000551848 1962 ntBASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSL3PQ5NE16 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 AC135050.7-201ENST00000624508 2218 ntBASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 ECEL1P2-202ENST00000465689 757 ntBASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTSL3PQ5NE16 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.33■□□□□ 0.53
CTSL3PQ5NE16 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms